| Paketname | libtfbs-perl |
| Beschreibung | scanning DNA sequence with a position weight matrix |
| Archiv/Repository | Offizielles Ubuntu Archiv lucid (universe) |
| Version | 0.5.svn.20091128-1 |
| Sektion | universe/perl |
| Priorität | optional |
| Installierte Größe | 748 Byte |
| Hängt ab von | perl (>= 5.10.0-24ubuntu4), perlapi-5.10.0, libc6 (>= 2.4), pdl, bioperl, libwww-perl, libdbi-perl |
| Empfohlene Pakete | libgd-gd2-perl | libgd-gd2-noxpm-perl |
| Paketbetreuer | Ubuntu Developers |
| Quelle | |
| Paketgröße | 197328 Byte |
| Prüfsumme MD5 | 7807087de72e9f007f9559f0c49676f4 |
| Prüfsumme SHA1 | a86a6591c397f4610574bfb89d7e3e453336517b |
| Prüfsumme SHA256 | 8c63a875a4f3e0864d7336d71f1c0d406ef15030a9c9337382db7b4c3c223fb2 |
| Link zum Herunterladen | libtfbs-perl_0.5.svn.20091128-1_i386.deb |
| Ausführliche Beschreibung | The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
.
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".
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